3DCityDB MCP Server

A Model Context Protocol (MCP) server that gives AI assistants direct, natural language access to the 3DCityDB v5.

It dynamically resolves object classes, properties, codelists, and generic attributes from the database so the AI can answer spatial questions, write and execute SQL queries, and reason about CityGML data — without any manual prompt engineering.

Features

• Dynamic schema resolution — walks the CityGML class hierarchy to discover available object classes and their properties

• Property filtering — only includes properties that actually exist in the database

• Codelist resolution — fetches code meanings only for codes present in the DB

• Generic attribute enrichment — automatic categorical detection for generic attributes

• Read-only query execution — run_query enforces SELECT-only; writes are blocked

• Prompt assembly — assemble_prompt orchestrates all tools into a complete system prompt in one call

• Gradio chat UI — browser-based interface with multi-LLM support (Anthropic, OpenAI, Ollama)

• CityGML/CityJSON import — one-click import via the Gradio UI (fullstack Docker mode only)

Deployment Options

There are three ways to run the 3DCityDB MCP Server:

Option 1: PyPI Package

Install the MCP server as a Python package and connect it to Claude Code, Claude Desktop, or any MCP-compatible client.

Prerequisites

• Python 3.10 or later

• A running 3DCityDB v5 PostgreSQL instance with PostGIS

Installation

pip install 3dcitydb-mcp-server

Or install from source for development:

git clone https://github.com/tum-gis/3dcitydb-mcp-server.git
cd 3dcitydb-mcp-server
pip install -e .

Configuration

Copy the example environment file and edit it:

# Linux / macOS
cp .env.example .env

# Windows (PowerShell)
Copy-Item .env.example .env

Then fill in your connection details:

# 3DCityDB PostgreSQL connection
CITYDB_HOST=localhost
CITYDB_PORT=5432
CITYDB_NAME=citydb
CITYDB_USER=postgres
CITYDB_PASSWORD=your_password_here
CITYDB_SCHEMA=citydb

# Query behaviour (optional)
CATEGORICAL_THRESHOLD=20
SAMPLE_VALUES_COUNT=5

# LLM API keys (only needed for the LangChain agent CLI, not for Claude Code/Desktop)
ANTHROPIC_API_KEY=sk-ant-...
# OPENAI_API_KEY=sk-...
# OLLAMA_BASE_URL=http://localhost:11434

The server loads .env automatically by searching upward from the working directory.

Verify your installation

3dcitydb-doctor

Checks Python version, required packages, database connectivity, PostGIS/SFCGAL extensions, and the 3DCityDB v5 schema. Exits 0 if all critical checks pass.

Connect to Claude Code (recommended)

From the directory containing your .env:

claude mcp add 3dcitydb -- 3dcitydb-mcp
claude

The MCP server starts automatically when you open a Claude session. Use /mcp inside the session to confirm it is connected.

Connect to Claude Desktop

Add to your claude_desktop_config.json:

{
  "mcpServers": {
    "3dcitydb": {
      "command": "3dcitydb-mcp",
      "cwd": "/path/to/your/project"
    }
  }
}

Restart Claude Desktop. The MCP server will be listed in Settings → Developer → MCP Servers.

SSE transport (remote / production)

Run the server over HTTP for remote clients:

3dcitydb-mcp-sse --host 0.0.0.0 --port 8080

• Clients connect via: http://your-server:8080/sse

• Health check: http://your-server:8080/health

LangChain agent CLI (optional)

A standalone CLI agent that uses the MCP tools directly:

3dcitydb-agent

Requires ANTHROPIC_API_KEY, OPENAI_API_KEY, or OLLAMA_BASE_URL in your .env.

Option 2: Docker — BYOD (Bring Your Own Database)

Run the Gradio chat UI as a Docker container, connected to your existing 3DCityDB instance.

Prerequisites

• Docker with Compose (V2)

• A running 3DCityDB v5 PostgreSQL instance accessible from the Docker host

⚠️ Spatial function support: The AI agent uses SFCGAL functions (CG_Volume, CG_3DArea, CG_MakeSolid) for geometry calculations. These require PostGIS to be compiled with SFCGAL support.

If your database lacks SFCGAL, volume and 3D area queries will fail silently or return errors. To get full spatial support, use Option 3 (Fullstack) instead — it ships a pre-patched 3dcitydb-pg image with PostGIS + SFCGAL already enabled.

You can verify SFCGAL availability on your instance with:

SELECT postgis_sfcgal_version();

If this returns an error, spatial queries will not work.

Quick Start

# 1. Clone the repository (or just download docker-compose.byod.yml + .env.example)
git clone https://github.com/tum-gis/3dcitydb-mcp-server.git
cd 3dcitydb-mcp-server/production

# 2. Copy and edit the environment file
cp .env.example .env   # Linux / macOS
# Copy-Item .env.example .env   # Windows PowerShell

Edit .env with your database connection and at least one LLM API key:

# Your existing 3DCityDB instance
CITYDB_HOST=your-db-host
CITYDB_PORT=5432
CITYDB_NAME=citydb
CITYDB_USER=citydb
CITYDB_PASSWORD=your_password
CITYDB_SCHEMA=citydb

# At least one LLM provider (the UI auto-selects based on what is available)
ANTHROPIC_API_KEY=sk-ant-...
# OPENAI_API_KEY=sk-...
# OLLAMA_BASE_URL=http://host.docker.internal:11434

# 3. Pull the pre-built image and start (works on all platforms, no build needed)
docker compose -f docker-compose.byod.yml up -d

# 4. Open the UI
# http://localhost:7860

The pre-built image (khaoulakanna1/citydb-mcp-agent:latest) is pulled automatically from Docker Hub on first run.

What it includes

• Gradio chat UI — natural-language interface to your 3DCityDB

• MCP server — spawned automatically as a subprocess inside the container

• Auto provider detection — the UI selects Anthropic, OpenAI, or Ollama based on which keys are present in .env

Gradio UI overview

While the agent is working, the chat bubble shows live status: Thinking… → Running query… → Interpreting results…

Ollama users: Models without native tool-calling support (e.g. Qwen3 with extended thinking enabled) are handled automatically via a prompt-based fallback — no configuration needed. Expect roughly two LLM round-trips per question instead of one.

Prompt mode (auto): Models with ≥ 14 B parameters receive the full system prompt; smaller models receive a compact version to fit the context window. Override this per-query with the Prompt mode radio button in the UI (Auto / Compact / Full).

Building locally (optional)

If you want to build the image from source instead of pulling it:

# Linux / macOS
docker compose -f docker-compose.byod.yml up -d --build

# Windows — Docker BuildKit has a known ordering bug on Windows/NTFS.
# Disable it for local builds:
$env:DOCKER_BUILDKIT=0; docker compose -f docker-compose.byod.yml up -d --build

Windows note: The DOCKER_BUILDKIT=0 flag is only needed when building locally. Pulling the pre-built image (docker compose up -d without --build) works on Windows without any workaround.

Useful commands

# View logs
docker compose -f docker-compose.byod.yml logs -f

# Stop
docker compose -f docker-compose.byod.yml down

Option 3: Docker — Fullstack (Bundled PostgreSQL)

Run everything — PostgreSQL (with PostGIS and SFCGAL), the 3DCityDB schema, the MCP server, and the Gradio UI — in a single Docker Compose stack. No pre-existing database needed.

Prerequisites

• Docker with Compose (V2)

• A CityGML or CityJSON file to import (optional — the database starts empty)

Quick Start

# 1. Clone the repository (or just download docker-compose.fullstack.yml + .env.example)
git clone https://github.com/tum-gis/3dcitydb-mcp-server.git
cd 3dcitydb-mcp-server/production

# 2. Copy and edit the environment file
cp .env.example .env   # Linux / macOS
# Copy-Item .env.example .env   # Windows PowerShell

Edit .env:

# PostgreSQL settings for the bundled database
POSTGRES_DB=citydb
POSTGRES_USER=citydb
POSTGRES_PASSWORD=citydb
SRID=25832          # EPSG code for your data's coordinate system

# At least one LLM provider
ANTHROPIC_API_KEY=sk-ant-...
# OPENAI_API_KEY=sk-...
# OLLAMA_BASE_URL=http://host.docker.internal:11434

# 3. (Optional) Place your CityGML file in the data directory
mkdir -p data
cp /path/to/your/city.gml data/

# 4. Pull the pre-built image and start (works on all platforms, no build needed)
docker compose -f docker-compose.fullstack.yml up -d

# 5. Open the UI
# http://localhost:7860

Both images are pulled automatically from Docker Hub on first run. The first start takes ~60 seconds while PostgreSQL initialises.

Building locally (optional)

# Linux / macOS
docker compose -f docker-compose.fullstack.yml up -d --build

# Windows — disable BuildKit to avoid a known NTFS ordering bug:
$env:DOCKER_BUILDKIT=0; docker compose -f docker-compose.fullstack.yml up -d --build

Windows note: Only needed when building locally with --build. The default docker compose up -d (pull from Docker Hub) works on Windows without any workaround.

Import CityGML/CityJSON

Once the UI is open:

1. Go to the Import CityGML/CityJSON tab

2. Click Refresh to see files in ./production/data/

3. Select your file and click Import

4. Watch the live log — the import runs via ghcr.io/3dcitydb/citydb-tool (pulled automatically)

The data directory is mounted at ./production/data/ on the host and /app/data/ inside the container.

Coordinate reference system

Set SRID to the EPSG code for your data before the first start. Common values:

Useful commands

# View logs
docker compose -f docker-compose.fullstack.yml logs -f

# Stop (preserves database volume)
docker compose -f docker-compose.fullstack.yml down

# Stop and delete all data
docker compose -f docker-compose.fullstack.yml down -v

Configuration Reference

All options are set via environment variables (.env file or Docker Compose environment block).

Database connection

Fullstack only

LLM providers

At least one must be configured for the Docker variants. The Gradio UI auto-selects the provider based on what is available (Anthropic → OpenAI → Ollama, in that priority order).

Query behaviour

Ollama tuning (optional)

Available MCP Tools

Static (cached per session)

Dynamic (called at session start)

Runtime (per query)

Assembly

Architecture

  Claude Code / Claude Desktop / any MCP client
                      │
               MCP Protocol (stdio / SSE)
                      │
       ┌──────────────┴──────────────┐
       │   3DCityDB MCP Server       │
       │   assemble_prompt()         │
       │   scan_objectclasses()      │
       │   run_query()               │
       └──────────────┬──────────────┘
                      │
                 3DCityDB v5
               (PostgreSQL + PostGIS)


  Browser ──► Gradio UI (port 7860)           [Docker variants only]
                      │
          ┌───────────┴────────────┐
          │                        │
   Anthropic / OpenAI          Ollama (local)
   LiteLLM cloud backend       LangChain ReAct
                                (ChatOllama)
          │                        │
          └───────────┬────────────┘
                      │
               MCP Client (spawns citydb-mcp subprocess)
                      │
               3DCityDB MCP Server
                      │
                 3DCityDB v5

Citation

This work was developed at the Chair of Geoinformatics, TUM, in the group of Prof. Dr. Thomas H. Kolbe.

License

The 3DCityDB MCP server is distributed under the Apache License 2.0. See LICENCE for details.