Inkdex
Click on "Deploy Server".
Wait a few minutes for the server to deploy. Once ready, it will show a "Started" state.
In the chat, type
@followed by the MCP server name and your instructions, e.g., "@Inkdex search docs for refresh token expiration"
That's it! The server will respond to your query, and you can continue using it as needed.
Here is a step-by-step guide with screenshots.
Inkdex
MCP server for semantic search over markdown docs.
Tools
Tool | Description |
| Search indexed documentation. Returns matching chunks ranked by relevance. |
Related MCP server: QMD - Query Markdown
Usage
Add to your MCP client configuration:
{
"mcpServers": {
"inkdex": {
"command": "npx",
"args": [
"-y",
"inkdex"
],
"env": {
"DOCS_PATH": "/path/to/your/docs"
}
}
}
}Variable | Required | Description |
| Yes | Path to the directory containing markdown files to index |
How it works
Markdown files are split into chunks by heading structure and paragraph boundaries. Chunks are embedded locally using all-MiniLM-L6-v2 and stored in SQLite.
Search ranks results using both vector similarity and BM25 full-text matching, combined via Reciprocal Rank Fusion.
Results include the source, context, and text:
[mira/authentication.md]
<context>
Authentication > Token Expiration and Refresh
</context>
The refresh token expires...Available Tools
1 toolsearch_docsA
Search documentation for relevant information. Returns content that matches the query semantically.
Inputs: query (required).
Tool Schema Changelog
Recent tool additions, removals, and schema changes observed during successful MCP inspections.
Loading tool schema changelog…
TDQS
Scored across 1 tool
Only one tool exists, so there is no possibility of confusion between tools. Its purpose is clear.
The single tool name 'search_docs' uses a clear verb_noun structure in snake_case, consistent with common naming conventions.
A single tool is borderline; it may be sufficient for a narrow search-only purpose but feels thin for a broader documentation server.
The tool covers semantic search but lacks other potentially useful operations like retrieving a specific document or listing available documentation, which are common in documentation servers.
Maintenance
Related MCP Connectors
Search and reason over your Obsidian-style Markdown vault, right from ChatGPT.
Versioned documentation registry and semantic search for AI tools and coding assistants.
Convert PDFs, Office docs, websites and audio into AI-ready Markdown, then search and ask your docs.
Ingest, manage, and retrieve documents for RAG-powered AI applications
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