codebase-bridge-mcp

A read-only MCP server that lets a Claude chat — in the desktop or web app — explore your local repository and answer questions about it, returning synthesized answers with file:line references. No copy-pasting files, no giving the chat write access to your machine.

ask_codebase runs headless Claude Code (claude -p) inside your repo with an exclusive read-only tool set (Read Grep Glob — no Edit, Write, Bash, agents, or MCP) and a hook that confines reads to the target repo, so a disposable agent explores the code and returns a synthesized, file:line answer. See Security for exactly what is and isn't enforced.

Claude client  --MCP-->  codebase-bridge  -->  claude -p (Read/Grep/Glob only)
                                                └─ explores /path/to/your/repo

Why I built this

I do my best thinking about a problem in a conversational Claude chat, not in a coding agent — the back-and-forth on an idea tends to go deeper there. But every time I wanted to ask about a specific part of my code, I had to go hunting for the right file, find the relevant section, and paste it in by hand — every single question. It broke the flow exactly when I wanted to think freely.

I went looking for something to close the gap and found the existing codebase tools all point the wrong way: filesystem and repo-packing servers (like Repomix) feed a coding agent that already has your repo, and structural-index servers (like codebase-memory-mcp) need a coding agent to be the brain. Nothing brought a finished, read-only answer about my code into the chat where I was actually thinking. So I built it: it shells out to a headless, read-only Claude scoped to a single repo (Read/Grep/Glob only — no Write, no Bash), and hands the synthesized answer back to my chat. I can interrogate my codebase mid-conversation without ever leaving the thinking.

Related MCP server: repo-intelligence-mcp

Requirements

• Claude Code (claude) installed and authenticated.

• uv (runs the server with zero install — deps are declared inline in server.py).

• For the optional http transport: cloudflared or any HTTPS tunnel.

Tools

ask_codebase parameters:

• thread — a friendly name (e.g. "auth-investigation"). Reuse the same name to keep one Claude Code session alive — turn-based steering: each follow-up keeps prior context, so you redirect it and it stays cheap (prompt-cache hits, measured 45% → 95% → 99% cache-read across turns). Omit for a one-off fresh session.

• model — e.g. "sonnet" / "opus". Binds to a thread on its first call; a different model on an existing thread is refused with a note, because switching models forces a full-context reprocess. Start a new thread for a different model.

• effort — reasoning effort: low, medium, high, xhigh, max. Per-call (safe to vary within a thread — unlike model it doesn't invalidate the cache). Lower = cheaper/faster; raise it for hard cross-file reasoning. Unknown values are ignored with a note.

• show_steps — append the exploration trail so you see how it reached the answer and can steer the next turn.

Example answer:

Auth is enforced in app/middleware.py:42 (verify_token), called from the
@requires_auth decorator in app/security.py:18.

[bridge] explored via 2 step(s):
  1. grep 'verify_token'
  2. read app/middleware.py
--
[bridge] model=opus-4-8 | call=$0.0383 | cache 58k read / 19 fresh (100% cached)
[bridge] thread 'auth' total=$0.81 over 3 call(s) -- reuse this thread for cheap follow-ups

Install / run

stdio (recommended — Claude Desktop & Claude Code)

stdio is launched as a local subprocess by the client: no URL, no tunnel, no token.

Claude Code:

claude mcp add codebase-bridge -- uv run --script /ABS/PATH/server.py --repo /ABS/PATH/your-repo

Claude Desktop: edit ~/Library/Application Support/Claude/claude_desktop_config.json (macOS) — see examples/claude_desktop_config.json:

{
  "mcpServers": {
    "codebase-bridge": {
      "command": "/opt/homebrew/bin/uv",
      "args": ["run", "--script", "/ABS/PATH/server.py", "--repo", "/ABS/PATH/your-repo"]
    }
  }
}

Use the absolute path to uv (which uv) — Claude Desktop doesn't inherit your shell PATH. Restart Desktop after editing. Then ask: "Use ask_codebase on thread 'auth', show_steps: how does login work?"

http (only for claude.ai web)

claude.ai reaches servers from Anthropic's cloud, so it needs a public URL + token:

export BRIDGE_TOKEN=$(openssl rand -hex 16); echo "token: $BRIDGE_TOKEN"
uv run --script server.py --transport http --repo /ABS/PATH/your-repo   # 127.0.0.1:8765
cloudflared tunnel --url http://localhost:8765                  # new terminal

http transport refuses to start without BRIDGE_TOKEN (pass --insecure-no-auth to deliberately run an open server, e.g. when you front it with your own auth). It binds 127.0.0.1 by default — the tunnel connects to localhost; set --host 0.0.0.0 only if you really need other interfaces. The token check is constant-time.

Add https://<tunnel>.trycloudflare.com/mcp (no trailing slash) as a custom connector in claude.ai with the bearer token.

Configuration

All knobs have CLI flags and/or env vars:

Security

This project has not been independently security-audited. It is hardened, and the guarantees below are enforced and were verified empirically — but read this before exposing it to untrusted input.

What is enforced (default), at Claude's tool-dispatch layer:

• Exclusive read-only tool set. The agent is launched with --tools "Read Grep Glob" — the exclusive built-in tool flag (unlike --allowedTools, which is merely additive and lets unlisted tools still run). The agent literally has no Bash, Edit, Write, agent/subagent, or MCP tool — verified: it reports only Read/Grep/Glob.

• Reads confined to --repo. A PreToolUse hook (this script, registered via --settings) runs host-side before every tool call and denies any read whose path resolves outside the target repo (absolute paths, ../, /proc/self/environ, etc.) — verified: reading /etc/hosts is rejected with "outside the target repo". This is the one thing no claude flag does (Read accepts absolute paths by design). Disable with BRIDGE_CONFINE_READS=0 for trusted local cross-repo use.

• No shell injection / no flag injection. Argv list (no shell); the question is passed after a -- end-of-options separator so it can't be reparsed as a flag.

• The server's own secrets aren't inherited. BRIDGE_* env vars (incl. BRIDGE_TOKEN) are stripped from the child env, and /proc/self/environ is outside the repo so the read hook blocks it too.

• http transport. Refuses to start without BRIDGE_TOKEN (override with --insecure-no-auth, itself refused on a non-loopback host), binds 127.0.0.1, constant-time token compare, concurrent subprocesses capped (BRIDGE_MAX_CONCURRENT).

The honest caveats:

• This is policy enforcement, not a kernel sandbox. The tool restriction and read hook are evaluated by Claude Code host-side and are deterministic (the model can't reason around them), but they are not an OS-level boundary. For a fully untrusted client (e.g. exposed over a public tunnel), additionally wrap the process in an OS sandbox (sandbox-exec on macOS, bubblewrap on Linux, or a container) so even a hypothetical claude/Node compromise can't escape. (code.claude.com/docs/sandboxing.)

• Files inside the repo are readable — including any secrets committed there (.env, keys). Point it at repos you trust to expose.

• Prompt injection. Untrusted content inside repo files could try to misdirect the agent; the read-confinement hook limits the blast radius to the repo itself.

Known limitations

• State is in-memory and per-process. Thread sessions and the cost ledger reset on restart; there is no cross-restart persistence (by design for now). Idle threads are dropped after BRIDGE_THREAD_TTL and evicted by LRU past BRIDGE_MAX_THREADS.

• No mid-flight cancellation. Cancelling the MCP request does not kill the running claude subprocess; it finishes (bounded by BRIDGE_TIMEOUT).

• Depends on the claude CLI's output schema. It parses --output-format stream-json; a future CLI change could require an update (the smoke test guards the tool surface, not the parser).

• Not independently security-audited. Reviewed adversarially (incl. by separate AI reviewers) but not professionally audited.

Cost model

Each ask_codebase call spins up a fresh headless Claude Code agent, so dollar cost varies with how much it explores. The win from thread reuse shows as a climbing cache-hit rate and cheap short follow-ups — not a strictly lower price every call. State is in-memory per server process; restarting resets threads and the ledger.

Development

uv run tests/smoke.py   # MCP handshake + tool-surface check (no API key needed)
uv build                # build wheel + sdist

CI runs both on every push/PR (.github/workflows/ci.yml).

License

MIT — see LICENSE.