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\n\n $\"Cipher$ \n\n

\nMemory-powered AI agent framework with MCP integration\n

\n\n

\n $\"License\"$ \n $\"Beta\"$ \n $\"Documentation\"$ \n $\"Discord\"$ \n

\n\n

\n \n $\"Cipher by Byterover$ \n \n

\n\n## Overview\n\nCipher is an opensource memory layer specifically designed for coding agents. Compatible with **Cursor, Windsurf, Claude Desktop, Claude Code, Gemini CLI, AWS's Kiro, VS Code, and Roo Code** through MCP, and coding agents, such as **Kimi K2**. (see more on [examples](./examples))\n\nBuilt by [Byterover team](https://byterover.dev/)\n\n**Key Features:**\n\n- 🔌 MCP integration with any IDE you want.\n- 🧠 Auto-generate AI coding memories that scale with your codebase.\n- 🔄 Switch seamlessly between IDEs without losing memory and context.\n- 🤝 Easily share coding memories across your dev team in real time.\n- 🧬 Dual Memory Layer that captures System 1 (Programming Concepts & Business Logic & Past Interaction) and System 2 (reasoning steps of the model when generating code).\n- ⚙️ Install on your IDE with zero configuration needed.\n\n## Quick Start 🚀\n\n### NPM Package (Recommended for Most Users)\n\n```bash\n# Install globally\nnpm install -g @byterover/cipher\n\n# Or install locally in your project\nnpm install @byterover/cipher\n```\n\n### Docker\n\n

Show Docker Setup

\n\n```bash\n# Clone and setup\ngit clone https://github.com/campfirein/cipher.git\ncd cipher\n\n# Configure environment\ncp .env.example .env\n# Edit .env with your API keys\n\n# Start with Docker\ndocker-compose up --build -d\n\n# Test\ncurl http://localhost:3000/health\n```\n\n> **💡 Note:** Docker builds automatically skip the UI build step to avoid ARM64 compatibility issues with lightningcss. The UI is not included in the Docker image by default.\n>\n> To include the UI in the Docker build, use: `docker build --build-arg BUILD_UI=true .`\n\n

\n\n### From Source\n\n```bash\npnpm i && pnpm run build && npm link\n```\n\n### CLI Usage 💻\n\n

Show CLI commands

\n\n```bash\n# Interactive mode\ncipher\n\n# One-shot command\ncipher \"Add this to memory as common causes of 'CORS error' in local dev with Vite + Express.\"\n\n# API server mode\ncipher --mode api\n\n# MCP server mode\ncipher --mode mcp\n\n# Web UI mode\ncipher --mode ui\n```\n\n> **⚠️ Note:** When running MCP mode in terminal/shell, export all environment variables as Cipher won't read from `.env` file.\n>\n> **💡 Tip:** CLI mode automatically continues or creates the \"default\" session. Use `/session new ` to start a fresh session.\n\n

\n\n![Cipher Web UI](./assets/cipher_webUI.png)\n\n_The Cipher Web UI provides an intuitive interface for interacting with memory-powered AI agents, featuring session management, tool integration, and real-time chat capabilities._\n\n## Configuration\n\nCipher supports multiple configuration options for different deployment scenarios. The main configuration file is located at `memAgent/cipher.yml`.\n\n### Basic Configuration ⚙️\n\n

Show YAML example

\n\n```yaml\n# LLM Configuration\nllm:\n provider: openai # openai, anthropic, openrouter, ollama, qwen\n model: gpt-4-turbo\n apiKey: $OPENAI_API_KEY\n\n# System Prompt\nsystemPrompt: 'You are a helpful AI assistant with memory capabilities.'\n\n# MCP Servers (optional)\nmcpServers:\n filesystem:\n type: stdio\n command: npx\n args: ['-y', '@modelcontextprotocol/server-filesystem', '.']\n```\n\n

\n\n📖 **See [Configuration Guide](./docs/configuration.md)** for complete details.\n\n### Environment Variables 🔐\n\nCreate a `.env` file in your project root with these essential variables:\n\n

Show .env template

\n\n```bash\n# ====================\n# API Keys (At least one required)\n# ====================\nOPENAI_API_KEY=sk-your-openai-api-key\nANTHROPIC_API_KEY=sk-ant-your-anthropic-key\nGEMINI_API_KEY=your-gemini-api-key\nQWEN_API_KEY=your-qwen-api-key\n\n# ====================\n# Vector Store (Optional - defaults to in-memory)\n# ====================\nVECTOR_STORE_TYPE=qdrant # qdrant, milvus, or in-memory\nVECTOR_STORE_URL=https://your-cluster.qdrant.io\nVECTOR_STORE_API_KEY=your-qdrant-api-key\n\n# ====================\n# Chat History (Optional - defaults to SQLite)\n# ====================\nCIPHER_PG_URL=postgresql://user:pass@localhost:5432/cipher_db\n\n# ====================\n# Workspace Memory (Optional)\n# ====================\nUSE_WORKSPACE_MEMORY=true\nWORKSPACE_VECTOR_STORE_COLLECTION=workspace_memory\n\n# ====================\n# AWS Bedrock (Optional)\n# ====================\nAWS_ACCESS_KEY_ID=your-aws-access-key\nAWS_SECRET_ACCESS_KEY=your-aws-secret-key\nAWS_DEFAULT_REGION=us-east-1\n\n# ====================\n# Advanced Options (Optional)\n# ====================\n# Logging and debugging\nCIPHER_LOG_LEVEL=info # error, warn, info, debug, silly\nREDACT_SECRETS=true\n\n# Vector store configuration\nVECTOR_STORE_DIMENSION=1536\nVECTOR_STORE_DISTANCE=Cosine # Cosine, Euclidean, Dot, Manhattan\nVECTOR_STORE_MAX_VECTORS=10000\n\n# Memory search configuration\nSEARCH_MEMORY_TYPE=knowledge # knowledge, reflection, both (default: knowledge)\nDISABLE_REFLECTION_MEMORY=true # default: true\n```\n\n> **💡 Tip:** Copy `.env.example` to `.env` and fill in your values:\n>\n> ```bash\n> cp .env.example .env\n> ```\n\n

\n\n## MCP Server Usage\n\nCipher can run as an MCP (Model Context Protocol) server, allowing integration with MCP-compatible clients like Claude Desktop, Cursor, Windsurf, and other AI coding assistants.\n\n### Quick Setup\n\nTo use Cipher as an MCP server in your MCP client configuration:\n\n```json\n{\n\t\"mcpServers\": {\n\t\t\"cipher\": {\n\t\t\t\"type\": \"stdio\",\n\t\t\t\"command\": \"cipher\",\n\t\t\t\"args\": [\"--mode\", \"mcp\"],\n\t\t\t\"env\": {\n\t\t\t\t\"MCP_SERVER_MODE\": \"aggregator\",\n\t\t\t\t\"OPENAI_API_KEY\": \"your_openai_api_key\",\n\t\t\t\t\"ANTHROPIC_API_KEY\": \"your_anthropic_api_key\"\n\t\t\t}\n\t\t}\n\t}\n}\n```\n\n📖 **See [MCP Integration Guide](./docs/mcp-integration.md)** for complete MCP setup and advanced features.\n\n👉 **Built‑in tools overview** — expand the dropdown below to scan everything at a glance. For full details, see [`docs/builtin-tools.md`](./docs/builtin-tools.md) 📘.\n\n

Built-in Tools (overview)

\n\n- Memory\n - `cipher_extract_and_operate_memory`: Extracts knowledge and applies ADD/UPDATE/DELETE in one step\n - `cipher_memory_search`: Semantic search over stored knowledge\n - `cipher_store_reasoning_memory`: Store high-quality reasoning traces\n- Reasoning (Reflection)\n - `cipher_extract_reasoning_steps` (internal): Extract structured reasoning steps\n - `cipher_evaluate_reasoning` (internal): Evaluate reasoning quality and suggest improvements\n - `cipher_search_reasoning_patterns`: Search reflection memory for patterns\n- Workspace Memory (team)\n - `cipher_workspace_search`: Search team/project workspace memory\n - `cipher_workspace_store`: Background capture of team/project signals\n- Knowledge Graph\n - `cipher_add_node`, `cipher_update_node`, `cipher_delete_node`, `cipher_add_edge`\n - `cipher_search_graph`, `cipher_enhanced_search`, `cipher_get_neighbors`\n - `cipher_extract_entities`, `cipher_query_graph`, `cipher_relationship_manager`\n- System\n - `cipher_bash`: Execute bash commands (one-off or persistent)\n\n

\n\n## Tutorial Video: Claude Code with Cipher MCP\n\nWatch our comprehensive tutorial on how to integrate Cipher with Claude Code through MCP for enhanced coding assistance with persistent memory:\n\n[![Cipher + Claude Code Tutorial](https://img.youtube.com/vi/AZh9Py6g07Y/maxresdefault.jpg)](https://www.youtube.com/watch?v=AZh9Py6g07Y)\n\n> **Click the image above to watch the tutorial on YouTube.**\n\nFor detailed configuration instructions, see the [CLI Coding Agents guide](./examples/02-cli-coding-agents/README.md).\n\n## Documentation\n\n### 📚 Complete Documentation\n\n| Topic | Description |\n| ------------------------------------------------------------ | --------------------------------------------------------------------------------- |\n| [Configuration](./docs/configuration.md) | Complete configuration guide including agent setup, embeddings, and vector stores |\n| [LLM Providers](./docs/llm-providers.md) | Detailed setup for OpenAI, Anthropic, AWS, Azure, Qwen, Ollama, LM Studio |\n| [Embedding Configuration](./docs/embedding-configuration.md) | Embedding providers, fallback logic, and troubleshooting |\n| [Vector Stores](./docs/vector-stores.md) | Qdrant, Milvus, In-Memory vector database configurations |\n| [Chat History](./docs/chat-history.md) | PostgreSQL, SQLite session storage and management |\n| [CLI Reference](./docs/cli-reference.md) | Complete command-line interface documentation |\n| [MCP Integration](./docs/mcp-integration.md) | Advanced MCP server setup, aggregator mode, and IDE integrations |\n| [Workspace Memory](./docs/workspace-memory.md) | Team-aware memory system for collaborative development |\n| [Examples](./docs/examples.md) | Real-world integration examples and use cases |\n\n### 🚀 Next Steps\n\nFor detailed documentation, visit:\n\n- [Quick Start Guide](https://docs.byterover.dev/cipher/quickstart)\n- [Configuration Guide](https://docs.byterover.dev/cipher/configuration)\n- [Complete Documentation](https://docs.byterover.dev/cipher/overview)\n\n## Contributing\n\nWe welcome contributions! Refer to our [Contributing Guide](./CONTRIBUTING.md) for more details.\n\n## Community & Support\n\n**cipher** is the opensource version of the agentic memory of [byterover](https://byterover.dev/) which is built and maintained by the byterover team.\n\n- Join our [Discord](https://discord.com/invite/UMRrpNjh5W) to share projects, ask questions, or just say hi!\n- If you enjoy cipher, please give us a ⭐ on GitHub—it helps a lot!\n- Follow [@kevinnguyendn](https://x.com/kevinnguyendn) on X\n\n## Contributors\n\nThanks to all these amazing people for contributing to cipher!\n\n[Contributors](https://github.com/campfirein/cipher/graphs/contributors)\n\n## MseeP.ai Security Assessment Badge\n\n[![MseeP.ai Security Assessment Badge](https://mseep.net/pr/campfirein-cipher-badge.png)](https://mseep.ai/app/campfirein-cipher)\n\n## Star History\n\n\n $\"Star$ \n\n\n## License\n\nElastic License 2.0. 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