BioModels — Search Biological Models
biomodels.model.searchSearch the BioModels repository for peer-reviewed mathematical models of biological and biomedical systems. BioModels is the world's primary repository for quantitative kinetic models, hosted by EMBL-EBI. Contains 3,200+ models in SBML format covering signaling pathways, metabolic networks, gene regulation, pharmacokinetics, circadian rhythms, disease dynamics (COVID-19, diabetes, cancer), and more. Returns model accession IDs (BIOMD prefix = curated, MODEL prefix = submitted), names, formats, submitter info, and URLs. Filter by curation status to restrict to manually validated models. CC0 Public Domain — European Bioinformatics Institute (EMBL-EBI)
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| limit | No | Number of results to return (1–50, default 10) | |
| query | Yes | Keyword to search for biological mathematical models — e.g. "insulin signaling", "circadian clock", "glucose metabolism", "COVID-19". Supports free-text and can include organism names, disease terms, pathway names, or author names. | |
| offset | No | Pagination offset — number of results to skip (default 0) | |
| curation_status | No | Filter by curation status. "CURATED" returns only manually reviewed, peer-validated models from the BioModels curated branch (highest quality). "NON_CURATED" returns all submitted models including author-provided ones. Omit to search all models. |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| error | No | Present only when the call failed. Includes error code, message, request_id, and any provider-specific extras. | |
| result | No | Tool response payload. Shape varies per tool — consult the tool description and inputSchema. May be an object, array, string, or number depending on the upstream provider response. |