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Deep Research

deep_research
Read-onlyIdempotent

ACCOUNT REQUIRED (free — sign in via GitHub at https://pipeworx.io/signup; depth:"thorough" needs a paid plan). If you are not signed in, use ask_pipeworx instead — it works on every tier. Grounded multi-source research across Pipeworx's 1517 STRUCTURED data sources (SEC filings, FRED/BLS economics, FDA, USPTO patents, markets, science, government records, etc.) in ONE call — this is NOT open-web search. Decomposes your question into focused facets, routes each to the right one of 5,798 tools IN PARALLEL, and returns a findings packet: verbatim evidence + confidence + source + fetched_at + a stable pipeworx:// citation per finding, with explicit gaps[] for facets the data couldn't answer (never invented). Best for broad/multi-part questions over structured data ("compare X and Y's regulatory + financial exposure", "research the filings + market picture for ACME"). For a single lookup use ask_pipeworx (one LLM call, not many). For BREAKING or colloquial CURRENT-NEWS / "what's the world saying about X" topics, prefer ask_pipeworx — it routes to live news APIs and the *-news-feeds packs; deep_research returns mostly empty gaps[] when the topic isn't in the structured catalog. Second-hop iteration: depth:"standard" re-angles unanswered gaps (gap recovery); depth:"thorough" additionally chases the best leads from the first pass — so multi-step questions resolve in one call. Every finding carries a hop field and a citation_uri — a resolvable pipeworx:// record URI, present only when the source emits one that resources/read can actually serve, so a citation you get back is always fetchable. "standard" and "thorough" also return contradictions[] flagging findings that disagree. Large records are semantically excerpted to the passages relevant to each facet (not head-truncated), so answers deep in a long filing/series aren't missed. Expect 15-60s (thorough with its follow-up + contradiction pass: up to ~90s).

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
depthNoHow many facets to research in parallel: quick=3 (single hop), standard=3 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=6 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan).
questionYesThe research question, in natural language. Broad/multi-part is fine — decomposition is the point.

Schema Changelog

Changes observed during successful MCP inspections. Dates show when Glama detected each change.

  1. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan)."New value: +"How many facets to research in parallel: quick=3 (single hop), standard=3 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=6 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan)."
  2. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus a contradictions[] scan across findings)."New value: +"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan)."
  3. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3, standard=5 (default), thorough=8 (paid plans). \"thorough\" also runs a second ITERATIVE hop — a planner inspects the first-pass findings/gaps and chases the most valuable leads or recovers gaps, resolving multi-step questions in one call."New value: +"How many facets to research in parallel: quick=3 (single hop), standard=5 (default; adds a gap-recovery hop that re-angles unanswered facets), thorough=8 (paid; adds a full iterative hop that chases leads + recovers gaps, plus a contradictions[] scan across findings)."
  4. Changed1 schema field changed
    • changedInput schema / properties / depth / description
      Previous value: -"How many facets to research in parallel: quick=3, standard=5 (default), thorough=8 (paid plans)."New value: +"How many facets to research in parallel: quick=3, standard=5 (default), thorough=8 (paid plans). \"thorough\" also runs a second ITERATIVE hop — a planner inspects the first-pass findings/gaps and chases the most valuable leads or recovers gaps, resolving multi-step questions in one call."
  5. Added

TDQS

A4.5/5.0
Behavior5/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations (readOnlyHint, openWorldHint, idempotentHint, destructiveHint=false) are already strong; the description adds substantial context on top: account/paid-tier requirements, 15-90s latency expectations, the findings-packet return shape (verbatim evidence + confidence + source + fetched_at + gaps[] + contradictions[]), a no-hallucination guarantee ('never invented'), and semantic-excerpting behavior. No contradiction with annotations — readOnly agrees with a research tool.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness2/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description contains a leaked editorial placeholder — '(one large block about second iteration / hop / `hop` field / citation_uri...' — that reads as author notes left in the final text. Content is also duplicated: the citation_uri/resolvable-URI guarantee and the contradictions[] scan each appear twice nearly verbatim, and depth-tier behavior is repeated across the schema, the garbled block, and the clean text. Front-loading is good (account requirement first), but the repetition and unedited block are material structural defects.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a complex tool with no output schema and only 2 parameters, the description delivers the full operational picture: auth requirements, pricing tiers, latency, return packet structure, citation resolvability, and gap/contradiction behavior. Nothing an agent needs to call it correctly is missing — though the garbled duplication makes that information harder to extract cleanly than it should be.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100% and the depth enum description already documents facet counts, hops, and the contradictions scan. The description adds value beyond the schema by tying 'thorough' to a paid plan requirement and giving latency expectations per tier. This exceeds the baseline-3 for full schema coverage but does not drastically re-explain the parameters.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

States a precise verb+resource: 'Grounded multi-source research across Pipeworx's 1517 STRUCTURED data sources... in ONE call' with explicit negation ('this is NOT open-web search'). Clearly distinguishes from siblings by naming ask_pipeworx for single lookups and describing the facet-decomposition mechanism.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines5/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

Gives explicit routing rules: 'If you are not signed in, use ask_pipeworx instead' and 'For a single lookup use ask_pipeworx instead.' Also frames the ideal use case positively: 'Best for broad/multi-part questions over structured data' with concrete examples. No ambiguity about when this tool beats its alternatives.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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TDQS

A3.6/5.0
Disambiguation2/5

The tool set mixes general-purpose Pipeworx tools (ask_pipeworx, ai_visibility_check, bet_research) with only three paleontology-specific tools (find_fossils, get_taxon, list_subtaxa). Multiple similar 'ask_pipeworx' variants further blur distinctions, making it difficult for an agent to select the right tool without deep domain knowledge.

Naming Consistency3/5

Tool names are mostly in snake_case and somewhat descriptive, but the naming conventions vary widely: imperative verbs (find_fossils), interrogative (suggest_questions), and nouns (recent_alerts). The presence of multiple 'ask_pipeworx' variants with inconsistent suffixes (beta, grounded) adds confusion.

Tool Count2/5

With 34 tools, the server is oversized for its claimed paleontology focus. The vast majority of tools are unrelated to Paleobiology, making the server feel more like a general-purpose data API than a specialized paleontology tool. A focused server should have a smaller, targeted set.

Completeness2/5

For the Paleobiology Database purpose, the coverage is severely lacking: only three tools are directly relevant (find_fossils, get_taxon, list_subtaxa). Missing essential operations like searching taxa by name, retrieving occurrences by location, or accessing collections data. The tool set is not a coherent interface for the domain.