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Deep Research

deep_research
Read-onlyIdempotent

ACCOUNT REQUIRED (free — sign in via GitHub at https://pipeworx.io/signup; depth:"thorough" needs a paid plan). If you are not signed in, use ask_pipeworx instead — it works on every tier. Grounded multi-source research across Pipeworx's 1499 STRUCTURED data sources (SEC filings, FRED/BLS economics, FDA, USPTO patents, markets, science, government records, etc.) in ONE call — this is NOT open-web search. Decomposes your question into focused facets, routes each to the right one of 5,738 tools IN PARALLEL, and returns a findings packet: verbatim evidence + confidence + source + fetched_at + a stable pipeworx:// citation per finding, with explicit gaps[] for facets the data couldn't answer (never invented). Best for broad/multi-part questions over structured data ("compare X and Y's regulatory + financial exposure", "research the filings + market picture for ACME"). For a single lookup use ask_pipeworx (one LLM call, not many). For BREAKING or colloquial CURRENT-NEWS / "what's the world saying about X" topics, prefer ask_pipeworx — it routes to live news APIs and the *-news-feeds packs; deep_research returns mostly empty gaps[] when the topic isn't in the structured catalog. Second-hop iteration: depth:"standard" re-angles unanswered gaps (gap recovery); depth:"thorough" additionally chases the best leads from the first pass — so multi-step questions resolve in one call. Every finding carries a hop field and a citation_uri — a resolvable pipeworx:// record URI, present only when the source emits one that resources/read can actually serve, so a citation you get back is always fetchable. "standard" and "thorough" also return contradictions[] flagging findings that disagree. Large records are semantically excerpted to the passages relevant to each facet (not head-truncated), so answers deep in a long filing/series aren't missed. Expect 15-60s (thorough with its follow-up + contradiction pass: up to ~90s).

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
depthNoHow many facets to research in parallel: quick=3 (single hop), standard=3 (default; adds a gap-recovery hop that re-angles unanswered facets + a contradictions[] scan across findings), thorough=6 (paid; adds a full iterative hop that chases leads + recovers gaps, plus the contradictions[] scan).
questionYesThe research question, in natural language. Broad/multi-part is fine — decomposition is the point.

TDQS

A4.8/5.0
Behavior5/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Despite annotations already declaring readOnly/openWorld/idempotent/non-destructive, the description adds a wealth of non-redundant behavioral context: account gating and the paid 'thorough' tier, latency expectations (15-60s, up to ~90s), the 'never invented' gap guarantee, contradictions[] behavior per depth tier, citation resolvability semantics, and semantic excerpting of large records. No statement conflicts with the annotations.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The description is long (~350 words) but decision-critical information is front-loaded: account requirement and sibling fallback appear first, before mechanism, output format, and timing. It is dense with no filler, but loses a point for redundancy — the contradictions[] behavior is described both in the body and in the schema's depth parameter, and the citation-resolvability sentence is more verbose than necessary.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness5/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a complex tool with no output schema, the description fully compensates: it specifies the return packet contents (verbatim evidence, confidence, source, fetched_at, citation, gaps[], contradictions[]), the auth and cost model, the latency envelope, the exhaustive-scope guarantee, and the fallback path. An agent has everything it needs to decide whether to invoke and how to interpret the result.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema coverage is 100% and the schema's depth description is already rich, establishing a baseline of 3. The description adds genuine extra value: the paid-plan constraint on 'thorough' (a critical invocation gate absent from the schema) and the clarification that broad/multi-part natural-language questions are the intended input shape for the question parameter. This modest but operationally meaningful addition justifies one point above baseline.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description names a specific verb+resource ('multi-source research across Pipeworx's 1499 STRUCTURED data sources') and explicitly differentiates from siblings ('this is NOT open-web search', 'For a single lookup use ask_pipeworx'). It also explains the mechanism — decomposing questions into facets and routing to 5,738 tools in parallel — so an agent knows exactly what this tool is and is not.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines5/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

Gives explicit when-to-use ('Best for broad/multi-part questions over structured data'), explicit when-not-to ('For a single lookup use ask_pipeworx'), and a named fallback condition ('If you are not signed in, use ask_pipeworx instead — it works on every tier'). The alternative tool is named and the selection condition is unambiguous — nothing left to inference.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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TDQS

A3.7/5.0
Disambiguation3/5

Many tools have clear distinct purposes, but ask_pipeworx, ask_pipeworx_beta, ask_pipeworx_grounded, and deep_research have overlapping functionality with subtle differences, causing potential confusion. Overall, most tools are distinguishable.

Naming Consistency2/5

Tool names use a mix of patterns: some follow verb_noun (validate_claim, resolve_entity), others are compound nouns (polymarket_arbitrage, ai_visibility_check), and some are plain verbs (recall, forget). Inconsistent style and length reduce predictability.

Tool Count3/5

At 34 tools, the count is on the high side for a typical server, but it might be manageable if the scope were broad. However, the server name 'Opentreeoflife' suggests a narrow biological focus, making the large count feel mismatched and excessive.

Completeness1/5

For a server named after a tree-of-life database, only three tools (match_names, common_ancestor, taxon_info) are relevant. Missing fundamental operations like listing children, searching taxa, or retrieving phylogenetic trees leaves the domain severely incomplete.