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Search studies

search_studies
Read-onlyIdempotent

Search the curated studies by keywords, optionally filtered by evidence code, a linked entity (gene, drug, disease...) and year range. Searches title, finding, authors (author-list form "Sabatini DM" and full names of profiled authors), PMID, DOI, PMCID, linked entities and their synonyms, journal, model system and the abstract excerpt. A query that is a PMID or DOI returns that study. Returns summary records with evidence codes and URLs.

Input Schema

NameRequiredDescriptionDefault
limitNoMaximum 50; a larger value is capped at 50.
queryNoKeywords, e.g. "rapamycin lifespan mice", a person ("Claudio De Virgilio"), a PMID or a DOI. Omit to list by filters only.
entityNoOnly studies linked to this entity (name, synonym or id), e.g. "Rheb".
offsetNoFor the next page: pass next_offset from the previous answer.
year_toNo
year_fromNo
evidence_codeNoKeep only these evidence codes, e.g. ["H","S"] for human evidence.

Schema Changelog

Changes observed during successful MCP inspections.

  1. Changed1 schema field changed
    • changedInput schema / properties / query / description
      Previous value: -"Keywords, e.g. \"rapamycin lifespan mice\". Omit to list by filters only."New value: +"Keywords, e.g. \"rapamycin lifespan mice\", a person (\"Claudio De Virgilio\"), a PMID or a DOI. Omit to list by filters only."
  2. Changed4 schema fields changed
    • addedInput schema / properties / limit / description
      Added value: +"Maximum 50; a larger value is capped at 50."
    • changedInput schema / properties / limit / maximum
      Previous value: -50New value: +9007199254740991
    • changedInput schema / properties / year_from / minimum
      Previous value: --9007199254740991New value: +-10000
    • changedInput schema / properties / year_to / minimum
      Previous value: --9007199254740991New value: +-10000
  3. First observed

TDQS

A4.1/5.0
Behavior4/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare readOnlyHint, idempotentHint, destructiveHint=false and openWorldHint=false, so safety is covered. The description adds genuine behavioral detail: the exact fields matched, the special PMID/DOI short-circuit behavior, and the shape of the result ('summary records with evidence codes and URLs'). It omits the 50-result cap, but that is disclosed in the schema.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

Three sentences, front-loaded with purpose and filters before the field enumeration. The long third sentence listing searchable fields is dense but each item is decision-relevant, so little is wasted.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

With no output schema and 7 optional parameters, the description compensates by naming the return format and the identifier special case. Pagination is delegated to the offset schema description, which is a reasonable split, though a brief note on result volume/next_offset would close the remaining gap.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters4/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

The description adds meaning beyond the schema: it maps the entity filter to gene/drug/disease and clarifies author matching accepts both the author-list form "Sabatini DM" and full names. Evidence code, year range and keyword semantics are named, giving conceptual coverage of most of the 7 parameters on top of the 71% schema coverage.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose5/5

Does the description clearly state what the tool does and how it differs from similar tools?

States a specific verb (search) and resource (curated studies), then enumerates the filter dimensions (keywords, evidence code, linked entity, year range) and the searchable fields. An agent can distinguish it from get_study (single record) and from search_authors/search_entities without opening any schema.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines3/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

Usage is implied through the filter list and the note that a PMID/DOI query returns that study, which tells the agent a lookup-style query is valid here. However, it never states when to prefer get_study over this, nor any exclusions or prerequisites, leaving routing to inference.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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