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SanYu Research Engine

act_gene_pathway

Read-only

【基因-通路-疾病网络】 用户要从一批基因找通路、疾病、药物关联 返回:通路/疾病/药物关联 (真实算法引擎执行,非大模型生成)

Input Schema

NameRequiredDescriptionDefault
genesYes基因列表

Schema Changelog

Changes observed during successful MCP inspections.

  1. First observed

TDQS

A3.5/5.0
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations already declare readOnly=true, destructive=false, and openWorld=false, so the safety profile is covered. The description adds one genuinely useful behavioral fact: results come from a real algorithm engine rather than LLM generation. However, it says nothing about input-size limits, latency, or how associations are ranked or scored.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness4/5

Is the description appropriately sized, front-loaded, and free of redundancy?

The definition is short and front-loaded: the bracketed title sets the domain, then the use case, then the return values. The bracket title duplicates the annotation title, which is minor waste, but no sentence is confusing or buried.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

For a single-parameter, read-only tool with no output schema, the description covers the essential contours: what goes in, what comes out, and the provenance of the results. What is missing is detail on the shape of the returned associations and any identifier conventions, which would make it fully self-sufficient.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

There is a single parameter, genes, documented at 100% schema coverage as 'gene list'. The description does not add syntax guidance such as accepted gene identifier formats (symbol, Ensembl ID), species assumptions, or a maximum list length, so it stays at the baseline where the schema does the work.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

The description states a specific resource and transformation: from a batch of genes, find pathway, disease, and drug associations, summarized in the bracket title as a gene-pathway-disease network. This distinguishes it reasonably well from nearby siblings like act_enrich or act_ppi_network, but it never names those alternatives explicitly.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines3/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

It implies the usage scenario ('when the user wants to find pathway/disease/drug associations from a batch of genes') but gives no exclusions and does not route the agent away from similar tools such as act_enrich or act_ppi_network. The condition for use is clear only in the most general sense.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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