PCR / qPCR master mix
pcr_master_mixUse when someone sets up a PCR or qPCR reaction mix for several wells. Calculates volume of each component per reaction and for the whole mix with excess, with water filling the remaining volume. Give each component a stock and final concentration (molar, ng/µL, x buffer, %), an amount per reaction (e.g. 1.25 U polymerase from 5 U/µL, 10 ng template from ng/µL), or a fixed volume. Template can be added per well separately. Do not list water; it is calculated.
Input Schema
| Name | Required | Description | Default |
|---|---|---|---|
| reactions | No | Number of reactions (wells), including controls. | |
| components | No | Master mix components except water (water fills the remaining volume). Give each either a stock and final concentration (or amount per reaction), or a fixed volume per reaction. | |
| reactionName | No | Name for the master mix, e.g. 'IL-6 qPCR plate 2'. | |
| excessPercent | No | Extra master mix to cover pipetting loss, as a percent of the reactions. | |
| reactionVolume | No | Total volume of one reaction, including template. | |
| templateVolume | No | Template volume added to each well separately (not in the master mix). | |
| reactionVolumeUnit | No | uL | |
| templateVolumeUnit | No | Defaults to the reaction volume unit. |
Output Schema
| Name | Required | Description | Default |
|---|---|---|---|
| card | No | What the Verbex card draws; same values as the notebook entry. | |
| tool | Yes | ||
| result | No | ||
| humanUrl | No | ||
| warnings | No | ||
| safetyNotes | No | ||
| toolVersion | No | ||
| notebookEntry | No | Markdown entry to paste into a lab notebook. | |
| validationErrors | No |