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PeptideLab Calculator

Plan a compound stack

plan_stack
Read-only

Plan a multi-compound stack: per-compound draw volumes and units, combined draw volume with split-injection advisories, and frequency-conflict detection. Research use only.

Input Schema

TableJSON Schema
NameRequiredDescriptionDefault
langNoLanguage for human-readable fields.en
entriesYes2–4 compounds in the stack.
syringe_typeNoSyringe grading: U-100 (1 ml = 100 units) or U-40 (1 ml = 40 units).U100
syringe_capacity_mlNoBarrel capacity in ml. Common: 0.3, 0.5, 1.

Schema Changelog

Changes observed during successful MCP inspections.

  1. First observed

TDQS

A3.8/5.0
Behavior4/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

Annotations declare readOnlyHint=true, so the safety profile is already covered; the description still adds real value by disclosing what the computation produces — per-compound draws, a combined draw with split-injection advisories, and frequency-conflict detection. With no output schema, this output disclosure matters. It omits any error/permission behavior, but none is critical for a pure calculation.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

A single front-loaded sentence with a colon-delimited list of three outputs, plus a short research-use trailer. Every clause earns its place and nothing is padded.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness4/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

With no output schema, the description correctly carries the return-value burden by naming the three result categories. It does not mention guidance on defaults or how the stack relates to scheduling tools like plan_schedule/get_protocol, but for a bounded calculation tool this is close to complete.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters3/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 100%, so peptide, vial_mg, water_ml, dose_mcg, syringe_type and syringe_capacity_ml are all documented in the schema. The description adds no additional parameter meaning (e.g., how dose_mcg interacts with the draw-unit conversion), so baseline 3 applies.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

States a specific verb ('Plan') and resource ('multi-compound stack') and enumerates the concrete outputs (per-compound draw volumes/units, combined draw volume with split-injection advisories, frequency-conflict detection). The 'multi-compound' framing implicitly separates it from single-compound calc_reconstitution, but it never names a sibling outright.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines3/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

Usage is only implied: the 2–4 compound scope and 'multi-compound' wording suggest this is the stack-planning tool rather than calc_reconstitution or plan_schedule, but no explicit when-to-use, when-not, or alternative is named.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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