covams_detect_features
Detect LC-MS features (m/z + retention time + intensity + charge) from a whole mzML/mzXML run.
Unlike the peak-list MS tools, this takes the RAW LC-MS FILE by reference
(path = a signed URL or local path) and returns EVERY detected feature, not
one collapsed spectrum — the entry point for untargeted metabolomics. Uses
pyOpenMS FeatureFinderMetabo when available, else a scipy m/z-binning
fallback (the response's method_used field reports which ran).Input Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| path | Yes | ||
| api_key | No | ||
| noise_threshold | No | ||
| min_trace_length | No | ||
| mass_trace_mz_tolerance | No |
Output Schema
TableJSON Schema
| Name | Required | Description | Default |
|---|---|---|---|
| result | Yes |