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CovaSyn Chemistry Tools

covabasic_validate

Validate SMILES with 15+ checks: parsability, valence, stereo, aromaticity, charge, size limits, isotopes, radicals.

Input Schema

NameRequiredDescriptionDefault
smilesYes
api_keyNo

Output Schema

NameRequiredDescriptionDefault
resultYes

Schema Changelog

Changes observed during successful MCP inspections.

  1. First observed

TDQS

B3.1/5.0
Behavior3/5

Does the description disclose side effects, auth requirements, rate limits, or destructive behavior?

No annotations are provided, so the description carries the full behavioral burden. It usefully discloses what is checked (parsability, valence, stereo, etc.), but says nothing about what happens on failure, whether invalid input errors or returns findings, or whether the operation is read-only. Partial disclosure only.

Agents need to know what a tool does to the world before calling it. Descriptions should go beyond structured annotations to explain consequences.

Conciseness5/5

Is the description appropriately sized, front-loaded, and free of redundancy?

A single front-loaded sentence that puts the verb and resource first, then the enumerated checks. Zero filler and no redundancy.

Shorter descriptions cost fewer tokens and are easier for agents to parse. Every sentence should earn its place.

Completeness3/5

Given the tool's complexity, does the description cover enough for an agent to succeed on first attempt?

An output schema exists, so return-value detail is not required. However, for a validation tool with no annotations and 0% parameter coverage, the description should say more about usage context and parameter meaning to be complete.

Complex tools with many parameters or behaviors need more documentation. Simple tools need less. This dimension scales expectations accordingly.

Parameters2/5

Does the description clarify parameter syntax, constraints, interactions, or defaults beyond what the schema provides?

Schema description coverage is 0%, so the description should compensate. It implies the input is a SMILES string but never states the parameter explicitly, that it is required, or what api_key is for. Half the parameters are entirely undocumented in both schema and description.

Input schemas describe structure but not intent. Descriptions should explain non-obvious parameter relationships and valid value ranges.

Purpose4/5

Does the description clearly state what the tool does and how it differs from similar tools?

States a specific verb (Validate) and resource (SMILES) and enumerates the check categories performed. It is clear what the tool does, but it does not differentiate itself from close siblings such as covabasic_filter_check or covabasic_standardize, which also assess molecule quality.

Agents choose between tools based on descriptions. A clear purpose with a specific verb and resource helps agents select the right tool.

Usage Guidelines2/5

Does the description explain when to use this tool, when not to, or what alternatives exist?

No guidance is given on when to use this tool versus alternatives, nor on preconditions. With siblings like covabasic_filter_check and covabasic_standardize overlapping in intent, the absence of routing guidance is a real gap.

Agents often have multiple tools that could apply. Explicit usage guidance like "use X instead of Y when Z" prevents misuse.

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